Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Best1O88870 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Best1O88870 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Best1O88870 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Best1O88870 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Best1O88870 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Best1O88870 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Best1O88870 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Best1O88870 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Best1O88870 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Best1O88870 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.66■□□□□ 0.74
Best1O88870 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Best1O88870 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Best1O88870 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Best1O88870 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Best1O88870 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Best1O88870 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Best1O88870 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Best1O88870 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.65■□□□□ 0.74
Best1O88870 Mir6236-201ENSMUST00000184437 123 ntBASIC19.65■□□□□ 0.74
Best1O88870 Gm8493-201ENSMUST00000196881 489 ntBASIC19.65■□□□□ 0.74
Best1O88870 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.65■□□□□ 0.74
Best1O88870 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Best1O88870 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Best1O88870 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Best1O88870 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.64■□□□□ 0.74
Best1O88870 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Best1O88870 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Best1O88870 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.64■□□□□ 0.73
Best1O88870 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Best1O88870 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Best1O88870 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Best1O88870 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Best1O88870 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Best1O88870 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Best1O88870 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.64■□□□□ 0.73
Best1O88870 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Best1O88870 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.63■□□□□ 0.73
Best1O88870 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Best1O88870 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.63■□□□□ 0.73
Best1O88870 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Best1O88870 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.63■□□□□ 0.73
Best1O88870 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Best1O88870 Spcs1-204ENSMUST00000226782 949 ntBASIC19.63■□□□□ 0.73
Best1O88870 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Best1O88870 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Best1O88870 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Best1O88870 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Best1O88870 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.62■□□□□ 0.73
Best1O88870 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Best1O88870 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.62■□□□□ 0.73
Best1O88870 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Best1O88870 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Best1O88870 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Best1O88870 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Best1O88870 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Best1O88870 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Best1O88870 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Best1O88870 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Best1O88870 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Best1O88870 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Best1O88870 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Best1O88870 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Best1O88870 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Best1O88870 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Best1O88870 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Best1O88870 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.6■□□□□ 0.73
Best1O88870 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Best1O88870 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Best1O88870 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Best1O88870 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Best1O88870 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.6■□□□□ 0.73
Best1O88870 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Best1O88870 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Best1O88870 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.6■□□□□ 0.73
Best1O88870 Gm43173-201ENSMUST00000202246 593 ntBASIC19.6■□□□□ 0.73
Best1O88870 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Best1O88870 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Best1O88870 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Best1O88870 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Best1O88870 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Best1O88870 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.59■□□□□ 0.73
Best1O88870 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Best1O88870 Gm12251-201ENSMUST00000117893 792 ntBASIC19.59■□□□□ 0.73
Best1O88870 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.59■□□□□ 0.73
Best1O88870 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Best1O88870 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.59■□□□□ 0.73
Best1O88870 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Best1O88870 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.58■□□□□ 0.73
Best1O88870 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Best1O88870 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Best1O88870 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Best1O88870 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Best1O88870 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Best1O88870 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Best1O88870 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Best1O88870 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Best1O88870 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Best1O88870 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Best1O88870 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms