Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gm42642-201ENSMUST00000200683 355 ntBASIC19.45■□□□□ 0.7
Tgfbr3O88393 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.45■□□□□ 0.7
Tgfbr3O88393 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Tgfbr3O88393 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Tgfbr3O88393 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Tgfbr3O88393 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tgfbr3O88393 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tgfbr3O88393 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tgfbr3O88393 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tgfbr3O88393 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tgfbr3O88393 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tgfbr3O88393 Smad6-203ENSMUST00000179458 273 ntBASIC19.44■□□□□ 0.7
Tgfbr3O88393 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tgfbr3O88393 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfbr3O88393 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfbr3O88393 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.43■□□□□ 0.7
Tgfbr3O88393 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.43■□□□□ 0.7
Tgfbr3O88393 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.43■□□□□ 0.7
Tgfbr3O88393 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.43■□□□□ 0.7
Tgfbr3O88393 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.43■□□□□ 0.7
Tgfbr3O88393 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Tgfbr3O88393 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tgfbr3O88393 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tgfbr3O88393 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tgfbr3O88393 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.42■□□□□ 0.7
Tgfbr3O88393 Gm10849-201ENSMUST00000100397 618 ntBASIC19.42■□□□□ 0.7
Tgfbr3O88393 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.42■□□□□ 0.7
Tgfbr3O88393 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tgfbr3O88393 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tgfbr3O88393 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.42■□□□□ 0.7
Tgfbr3O88393 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tgfbr3O88393 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tgfbr3O88393 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tgfbr3O88393 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.41■□□□□ 0.7
Tgfbr3O88393 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tgfbr3O88393 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.41■□□□□ 0.7
Tgfbr3O88393 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.41■□□□□ 0.7
Tgfbr3O88393 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tgfbr3O88393 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tgfbr3O88393 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tgfbr3O88393 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfbr3O88393 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfbr3O88393 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfbr3O88393 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Tgfbr3O88393 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.4■□□□□ 0.7
Tgfbr3O88393 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfbr3O88393 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.4■□□□□ 0.7
Tgfbr3O88393 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tgfbr3O88393 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfbr3O88393 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfbr3O88393 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfbr3O88393 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfbr3O88393 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfbr3O88393 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.39■□□□□ 0.69
Tgfbr3O88393 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tgfbr3O88393 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tgfbr3O88393 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Tgfbr3O88393 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.38■□□□□ 0.69
Tgfbr3O88393 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tgfbr3O88393 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.38■□□□□ 0.69
Tgfbr3O88393 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tgfbr3O88393 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfbr3O88393 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfbr3O88393 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfbr3O88393 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfbr3O88393 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfbr3O88393 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.37■□□□□ 0.69
Tgfbr3O88393 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.37■□□□□ 0.69
Tgfbr3O88393 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfbr3O88393 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.37■□□□□ 0.69
Tgfbr3O88393 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfbr3O88393 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfbr3O88393 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfbr3O88393 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tgfbr3O88393 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.36■□□□□ 0.69
Tgfbr3O88393 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.36■□□□□ 0.69
Tgfbr3O88393 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfbr3O88393 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfbr3O88393 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfbr3O88393 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tgfbr3O88393 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Tgfbr3O88393 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfbr3O88393 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfbr3O88393 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfbr3O88393 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfbr3O88393 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tgfbr3O88393 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.35■□□□□ 0.69
Tgfbr3O88393 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Tgfbr3O88393 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfbr3O88393 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfbr3O88393 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Tgfbr3O88393 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfbr3O88393 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfbr3O88393 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.35■□□□□ 0.69
Tgfbr3O88393 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfbr3O88393 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Tgfbr3O88393 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfbr3O88393 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Tgfbr3O88393 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tgfbr3O88393 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms