Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Npc1O35604 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Npc1O35604 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Npc1O35604 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Npc1O35604 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Npc1O35604 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1O35604 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1O35604 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.79■□□□□ 0.76
Npc1O35604 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Npc1O35604 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Npc1O35604 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1O35604 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.79■□□□□ 0.76
Npc1O35604 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.79■□□□□ 0.76
Npc1O35604 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.79■□□□□ 0.76
Npc1O35604 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Npc1O35604 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1O35604 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1O35604 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1O35604 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Npc1O35604 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1O35604 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1O35604 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Npc1O35604 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.79■□□□□ 0.76
Npc1O35604 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1O35604 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Npc1O35604 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1O35604 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1O35604 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1O35604 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1O35604 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.78■□□□□ 0.76
Npc1O35604 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Npc1O35604 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Npc1O35604 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.78■□□□□ 0.76
Npc1O35604 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Npc1O35604 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Npc1O35604 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.77■□□□□ 0.76
Npc1O35604 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Npc1O35604 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1O35604 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1O35604 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1O35604 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Npc1O35604 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.76■□□□□ 0.75
Npc1O35604 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.76■□□□□ 0.75
Npc1O35604 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1O35604 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Npc1O35604 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1O35604 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1O35604 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1O35604 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Npc1O35604 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1O35604 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1O35604 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npc1O35604 Gm12821-201ENSMUST00000120022 600 ntBASIC19.75■□□□□ 0.75
Npc1O35604 Gm21956-201ENSMUST00000179946 522 ntBASIC19.75■□□□□ 0.75
Npc1O35604 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.75■□□□□ 0.75
Npc1O35604 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1O35604 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.74■□□□□ 0.75
Npc1O35604 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1O35604 Notumos-201ENSMUST00000151998 2659 ntBASIC19.74■□□□□ 0.75
Npc1O35604 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1O35604 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Npc1O35604 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1O35604 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1O35604 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.74■□□□□ 0.75
Npc1O35604 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.74■□□□□ 0.75
Npc1O35604 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npc1O35604 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Npc1O35604 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1O35604 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1O35604 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1O35604 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1O35604 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1O35604 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npc1O35604 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Npc1O35604 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Npc1O35604 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1O35604 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.72■□□□□ 0.75
Npc1O35604 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Npc1O35604 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Npc1O35604 Gm15039-201ENSMUST00000118914 875 ntBASIC19.72■□□□□ 0.75
Npc1O35604 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1O35604 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1O35604 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1O35604 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Npc1O35604 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npc1O35604 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
Npc1O35604 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1O35604 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1O35604 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1O35604 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Npc1O35604 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1O35604 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1O35604 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1O35604 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.71■□□□□ 0.75
Npc1O35604 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1O35604 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Npc1O35604 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1O35604 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npc1O35604 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.7■□□□□ 0.74
Npc1O35604 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms