Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Gm28043E0CXC2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Gm28043E0CXC2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.26■□□□□ 0.83
Gm28043E0CXC2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28043E0CXC2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Gm28043E0CXC2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Gm28043E0CXC2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28043E0CXC2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28043E0CXC2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.25■□□□□ 0.83
Gm28043E0CXC2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28043E0CXC2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28043E0CXC2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.25■□□□□ 0.83
Gm28043E0CXC2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28043E0CXC2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.25■□□□□ 0.83
Gm28043E0CXC2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Gm28043E0CXC2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm28043E0CXC2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Gm28043E0CXC2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm28043E0CXC2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Gm28043E0CXC2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Gm28043E0CXC2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Gm28043E0CXC2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm28043E0CXC2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Gm28043E0CXC2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm28043E0CXC2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Gm28043E0CXC2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28043E0CXC2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28043E0CXC2 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.22■□□□□ 0.83
Gm28043E0CXC2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28043E0CXC2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Gm28043E0CXC2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28043E0CXC2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Gm28043E0CXC2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28043E0CXC2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28043E0CXC2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Gm28043E0CXC2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28043E0CXC2 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28043E0CXC2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Gm28043E0CXC2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Gm28043E0CXC2 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.21■□□□□ 0.83
Gm28043E0CXC2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Gm28043E0CXC2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28043E0CXC2 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28043E0CXC2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28043E0CXC2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28043E0CXC2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28043E0CXC2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28043E0CXC2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gm28043E0CXC2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Gm28043E0CXC2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Gm28043E0CXC2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Gm28043E0CXC2 Gm5812-201ENSMUST00000061073 957 ntBASIC20.2■□□□□ 0.82
Gm28043E0CXC2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.2■□□□□ 0.82
Gm28043E0CXC2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm28043E0CXC2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm28043E0CXC2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm28043E0CXC2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Gm28043E0CXC2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.19■□□□□ 0.82
Gm28043E0CXC2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Gm28043E0CXC2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Gm28043E0CXC2 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm28043E0CXC2 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm28043E0CXC2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm28043E0CXC2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Gm28043E0CXC2 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.18■□□□□ 0.82
Gm28043E0CXC2 Gm10232-201ENSMUST00000089221 720 ntBASIC20.18■□□□□ 0.82
Gm28043E0CXC2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Gm28043E0CXC2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Gm28043E0CXC2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28043E0CXC2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28043E0CXC2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Gm28043E0CXC2 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28043E0CXC2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.16■□□□□ 0.82
Gm28043E0CXC2 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28043E0CXC2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28043E0CXC2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Gm28043E0CXC2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Gm28043E0CXC2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm28043E0CXC2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Gm28043E0CXC2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm28043E0CXC2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm28043E0CXC2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Gm28043E0CXC2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Gm28043E0CXC2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28043E0CXC2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms