Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Col6a4A2AX52 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Col6a4A2AX52 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Col6a4A2AX52 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Col6a4A2AX52 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col6a4A2AX52 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col6a4A2AX52 Gm12933-201ENSMUST00000120203 872 ntBASIC17.16■□□□□ 0.34
Col6a4A2AX52 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col6a4A2AX52 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col6a4A2AX52 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col6a4A2AX52 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col6a4A2AX52 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.16■□□□□ 0.34
Col6a4A2AX52 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Col6a4A2AX52 Gm42778-201ENSMUST00000199644 553 ntBASIC17.15■□□□□ 0.34
Col6a4A2AX52 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col6a4A2AX52 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col6a4A2AX52 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col6a4A2AX52 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col6a4A2AX52 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.15■□□□□ 0.34
Col6a4A2AX52 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Col6a4A2AX52 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Col6a4A2AX52 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col6a4A2AX52 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col6a4A2AX52 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col6a4A2AX52 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.14■□□□□ 0.33
Col6a4A2AX52 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col6a4A2AX52 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Col6a4A2AX52 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col6a4A2AX52 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col6a4A2AX52 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.12■□□□□ 0.33
Col6a4A2AX52 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC17.12■□□□□ 0.33
Col6a4A2AX52 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.12■□□□□ 0.33
Col6a4A2AX52 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col6a4A2AX52 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col6a4A2AX52 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col6a4A2AX52 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col6a4A2AX52 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col6a4A2AX52 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col6a4A2AX52 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col6a4A2AX52 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col6a4A2AX52 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col6a4A2AX52 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.12■□□□□ 0.33
Col6a4A2AX52 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col6a4A2AX52 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col6a4A2AX52 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col6a4A2AX52 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.11■□□□□ 0.33
Col6a4A2AX52 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col6a4A2AX52 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col6a4A2AX52 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col6a4A2AX52 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.11■□□□□ 0.33
Col6a4A2AX52 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col6a4A2AX52 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Col6a4A2AX52 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Col6a4A2AX52 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col6a4A2AX52 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col6a4A2AX52 Gm10602-201ENSMUST00000098239 609 ntBASIC17.1■□□□□ 0.33
Col6a4A2AX52 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col6a4A2AX52 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Col6a4A2AX52 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Col6a4A2AX52 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Col6a4A2AX52 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.1■□□□□ 0.33
Col6a4A2AX52 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col6a4A2AX52 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col6a4A2AX52 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.1■□□□□ 0.33
Col6a4A2AX52 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col6a4A2AX52 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Col6a4A2AX52 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col6a4A2AX52 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Col6a4A2AX52 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.09■□□□□ 0.33
Col6a4A2AX52 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col6a4A2AX52 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.09■□□□□ 0.33
Col6a4A2AX52 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col6a4A2AX52 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.09■□□□□ 0.33
Col6a4A2AX52 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col6a4A2AX52 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col6a4A2AX52 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Col6a4A2AX52 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.09■□□□□ 0.33
Col6a4A2AX52 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Col6a4A2AX52 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Col6a4A2AX52 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Col6a4A2AX52 Nespas-201ENSMUST00000143738 1083 ntBASIC17.08■□□□□ 0.33
Col6a4A2AX52 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Col6a4A2AX52 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Col6a4A2AX52 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Col6a4A2AX52 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms