Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav19A0A0B4J1K4 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.17■□□□□ 0.02
Trav19A0A0B4J1K4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav19A0A0B4J1K4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav19A0A0B4J1K4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav19A0A0B4J1K4 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav19A0A0B4J1K4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav19A0A0B4J1K4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav19A0A0B4J1K4 Gm14523-201ENSMUST00000117260 558 ntBASIC15.16■□□□□ 0.02
Trav19A0A0B4J1K4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav19A0A0B4J1K4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav19A0A0B4J1K4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav19A0A0B4J1K4 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.16■□□□□ 0.02
Trav19A0A0B4J1K4 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav19A0A0B4J1K4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav19A0A0B4J1K4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav19A0A0B4J1K4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav19A0A0B4J1K4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav19A0A0B4J1K4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav19A0A0B4J1K4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav19A0A0B4J1K4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav19A0A0B4J1K4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav19A0A0B4J1K4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav19A0A0B4J1K4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.15■□□□□ 0.02
Trav19A0A0B4J1K4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav19A0A0B4J1K4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav19A0A0B4J1K4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Gm43592-201ENSMUST00000196922 1165 ntBASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav19A0A0B4J1K4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav19A0A0B4J1K4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav19A0A0B4J1K4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav19A0A0B4J1K4 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav19A0A0B4J1K4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav19A0A0B4J1K4 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.13■□□□□ 0.01
Trav19A0A0B4J1K4 Gm27502-201ENSMUST00000183495 199 ntBASIC15.13■□□□□ 0.01
Trav19A0A0B4J1K4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav19A0A0B4J1K4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav19A0A0B4J1K4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Trav19A0A0B4J1K4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav19A0A0B4J1K4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav19A0A0B4J1K4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav19A0A0B4J1K4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav19A0A0B4J1K4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav19A0A0B4J1K4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav19A0A0B4J1K4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav19A0A0B4J1K4 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav19A0A0B4J1K4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav19A0A0B4J1K4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav19A0A0B4J1K4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav19A0A0B4J1K4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Gm7332-201ENSMUST00000118351 454 ntBASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav19A0A0B4J1K4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav19A0A0B4J1K4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Trav19A0A0B4J1K4 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav19A0A0B4J1K4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav19A0A0B4J1K4 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav19A0A0B4J1K4 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav19A0A0B4J1K4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav19A0A0B4J1K4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav19A0A0B4J1K4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav19A0A0B4J1K4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav19A0A0B4J1K4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav19A0A0B4J1K4 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav19A0A0B4J1K4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms