Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav11A0A0B4J1J9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav11A0A0B4J1J9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav11A0A0B4J1J9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav11A0A0B4J1J9 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav11A0A0B4J1J9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav11A0A0B4J1J9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav11A0A0B4J1J9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav11A0A0B4J1J9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav11A0A0B4J1J9 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav11A0A0B4J1J9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav11A0A0B4J1J9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav11A0A0B4J1J9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav11A0A0B4J1J9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav11A0A0B4J1J9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav11A0A0B4J1J9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav11A0A0B4J1J9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav11A0A0B4J1J9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav11A0A0B4J1J9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav11A0A0B4J1J9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav11A0A0B4J1J9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav11A0A0B4J1J9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav11A0A0B4J1J9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav11A0A0B4J1J9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav11A0A0B4J1J9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav11A0A0B4J1J9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav11A0A0B4J1J9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav11A0A0B4J1J9 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav11A0A0B4J1J9 AC116713.1-201ENSMUST00000215074 430 ntBASIC13.9□□□□□ -0.18
Trav11A0A0B4J1J9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trav11A0A0B4J1J9 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav11A0A0B4J1J9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav11A0A0B4J1J9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trav11A0A0B4J1J9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav11A0A0B4J1J9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav11A0A0B4J1J9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav11A0A0B4J1J9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav11A0A0B4J1J9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav11A0A0B4J1J9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC13.89□□□□□ -0.19
Trav11A0A0B4J1J9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav11A0A0B4J1J9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav11A0A0B4J1J9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav11A0A0B4J1J9 AC152827.1-201ENSMUST00000221143 2189 ntBASIC13.89□□□□□ -0.19
Trav11A0A0B4J1J9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav11A0A0B4J1J9 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav11A0A0B4J1J9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav11A0A0B4J1J9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Trav11A0A0B4J1J9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav11A0A0B4J1J9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav11A0A0B4J1J9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav11A0A0B4J1J9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav11A0A0B4J1J9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav11A0A0B4J1J9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav11A0A0B4J1J9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav11A0A0B4J1J9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav11A0A0B4J1J9 Golph3-202ENSMUST00000226517 2359 ntBASIC13.88□□□□□ -0.19
Trav11A0A0B4J1J9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav11A0A0B4J1J9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav11A0A0B4J1J9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav11A0A0B4J1J9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav11A0A0B4J1J9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav11A0A0B4J1J9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav11A0A0B4J1J9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav11A0A0B4J1J9 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav11A0A0B4J1J9 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms