Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.24■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Iqck-206ENSMUST00000208658 2891 ntBASIC19.23■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sirpb1aA0A0A6YYP6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.22■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1aA0A0A6YYP6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sirpb1aA0A0A6YYP6 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.21■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sirpb1aA0A0A6YYP6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.21■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Sirpb1aA0A0A6YYP6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sirpb1aA0A0A6YYP6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.2■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.2■□□□□ 0.66
Sirpb1aA0A0A6YYP6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.2■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.19■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.19■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.18■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.18■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.17■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sirpb1aA0A0A6YYP6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.16■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.15■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Gm12366-201ENSMUST00000121722 873 ntBASIC19.15■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.15■□□□□ 0.66
Sirpb1aA0A0A6YYP6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms