Protein–RNA interactions for Protein: A0A0A6YXN4

Ighv1-18, Immunoglobulin heavy variable V1-18 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-18A0A0A6YXN4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.5■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC16.5■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.5■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Gm28536-201ENSMUST00000190971 1317 ntBASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.48■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ighv1-18A0A0A6YXN4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ighv1-18A0A0A6YXN4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.46■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.46■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Golph3-202ENSMUST00000226517 2359 ntBASIC16.46■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ighv1-18A0A0A6YXN4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.45■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-18A0A0A6YXN4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.45■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-18A0A0A6YXN4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-18A0A0A6YXN4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.43■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-18A0A0A6YXN4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-18A0A0A6YXN4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-18A0A0A6YXN4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ighv1-18A0A0A6YXN4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms