Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav21-dv12A0A075B6C4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav21-dv12A0A075B6C4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav21-dv12A0A075B6C4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav21-dv12A0A075B6C4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav21-dv12A0A075B6C4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav21-dv12A0A075B6C4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Trav21-dv12A0A075B6C4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav21-dv12A0A075B6C4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav21-dv12A0A075B6C4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav21-dv12A0A075B6C4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav21-dv12A0A075B6C4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav21-dv12A0A075B6C4 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Gm10232-201ENSMUST00000089221 720 ntBASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav21-dv12A0A075B6C4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav21-dv12A0A075B6C4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Trav21-dv12A0A075B6C4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav21-dv12A0A075B6C4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav21-dv12A0A075B6C4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.55■□□□□ 0.08
Trav21-dv12A0A075B6C4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav21-dv12A0A075B6C4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trav21-dv12A0A075B6C4 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav21-dv12A0A075B6C4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.55■□□□□ 0.08
Trav21-dv12A0A075B6C4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav21-dv12A0A075B6C4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav21-dv12A0A075B6C4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav21-dv12A0A075B6C4 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav21-dv12A0A075B6C4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav21-dv12A0A075B6C4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav21-dv12A0A075B6C4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav21-dv12A0A075B6C4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav21-dv12A0A075B6C4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav21-dv12A0A075B6C4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav21-dv12A0A075B6C4 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav21-dv12A0A075B6C4 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav21-dv12A0A075B6C4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav21-dv12A0A075B6C4 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav21-dv12A0A075B6C4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav21-dv12A0A075B6C4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav21-dv12A0A075B6C4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav21-dv12A0A075B6C4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav21-dv12A0A075B6C4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav21-dv12A0A075B6C4 Gm10399-202ENSMUST00000202768 748 ntBASIC15.53■□□□□ 0.08
Trav21-dv12A0A075B6C4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav21-dv12A0A075B6C4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav21-dv12A0A075B6C4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav21-dv12A0A075B6C4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav21-dv12A0A075B6C4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav21-dv12A0A075B6C4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Trav21-dv12A0A075B6C4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav21-dv12A0A075B6C4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav21-dv12A0A075B6C4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav21-dv12A0A075B6C4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC15.52■□□□□ 0.08
Trav21-dv12A0A075B6C4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav21-dv12A0A075B6C4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav21-dv12A0A075B6C4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav21-dv12A0A075B6C4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav21-dv12A0A075B6C4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav21-dv12A0A075B6C4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav21-dv12A0A075B6C4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav21-dv12A0A075B6C4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav21-dv12A0A075B6C4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav21-dv12A0A075B6C4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.51■□□□□ 0.07
Trav21-dv12A0A075B6C4 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav21-dv12A0A075B6C4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav21-dv12A0A075B6C4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav21-dv12A0A075B6C4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav21-dv12A0A075B6C4 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav21-dv12A0A075B6C4 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav21-dv12A0A075B6C4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav21-dv12A0A075B6C4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav21-dv12A0A075B6C4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav21-dv12A0A075B6C4 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav21-dv12A0A075B6C4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav21-dv12A0A075B6C4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav21-dv12A0A075B6C4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav21-dv12A0A075B6C4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav21-dv12A0A075B6C4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav21-dv12A0A075B6C4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav21-dv12A0A075B6C4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav21-dv12A0A075B6C4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav21-dv12A0A075B6C4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms