Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.07□□□□□ -0.64
Cdh17Q9R100 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.07□□□□□ -0.64
Cdh17Q9R100 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.06□□□□□ -0.64
Cdh17Q9R100 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm43482-201ENSMUST00000202797 1861 ntBASIC11.06□□□□□ -0.64
Cdh17Q9R100 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm8752-201ENSMUST00000173427 1694 ntBASIC11.06□□□□□ -0.64
Cdh17Q9R100 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm15515-201ENSMUST00000117827 822 ntBASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm8731-201ENSMUST00000118088 412 ntBASIC11.06□□□□□ -0.64
Cdh17Q9R100 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm15374-201ENSMUST00000119313 844 ntBASIC11.06□□□□□ -0.64
Cdh17Q9R100 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm4857-201ENSMUST00000192718 785 ntBASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm4482-201ENSMUST00000200876 742 ntBASIC11.06□□□□□ -0.64
Cdh17Q9R100 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.06□□□□□ -0.64
Cdh17Q9R100 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.06□□□□□ -0.64
Cdh17Q9R100 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.06□□□□□ -0.64
Cdh17Q9R100 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.06□□□□□ -0.64
Cdh17Q9R100 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cdh17Q9R100 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.06□□□□□ -0.64
Cdh17Q9R100 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.05□□□□□ -0.64
Cdh17Q9R100 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.05□□□□□ -0.64
Cdh17Q9R100 Gm29499-201ENSMUST00000189151 486 ntBASIC11.05□□□□□ -0.64
Cdh17Q9R100 Gm28329-201ENSMUST00000191208 689 ntBASIC11.05□□□□□ -0.64
Cdh17Q9R100 Gm29171-201ENSMUST00000191397 486 ntBASIC11.05□□□□□ -0.64
Cdh17Q9R100 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Cdh17Q9R100 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.05□□□□□ -0.64
Cdh17Q9R100 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms