Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm22442-201ENSMUST00000157256 144 ntBASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 AC160410.1-201ENSMUST00000219298 1972 ntBASIC13.57□□□□□ -0.24
Ube3bQ9ES34 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.57□□□□□ -0.24
Ube3bQ9ES34 AC130823.1-201ENSMUST00000228929 1549 ntBASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.57□□□□□ -0.24
Ube3bQ9ES34 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ube3bQ9ES34 Rubie-203ENSMUST00000227803 2430 ntBASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Snord17-201ENSMUST00000104526 238 ntBASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Gm3344-201ENSMUST00000169610 603 ntBASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Gm18595-201ENSMUST00000175736 1068 ntBASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Gm45758-201ENSMUST00000212448 1006 ntBASIC13.56□□□□□ -0.24
Ube3bQ9ES34 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 AC160929.1-201ENSMUST00000221247 415 ntBASIC13.56□□□□□ -0.24
Ube3bQ9ES34 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ube3bQ9ES34 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.56□□□□□ -0.24
Ube3bQ9ES34 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Gm13117-201ENSMUST00000120894 691 ntBASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Gm14126-201ENSMUST00000122345 395 ntBASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC13.55□□□□□ -0.24
Ube3bQ9ES34 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Gm4895-201ENSMUST00000181646 1137 ntBASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Gm29410-201ENSMUST00000188383 694 ntBASIC13.55□□□□□ -0.24
Ube3bQ9ES34 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC13.55□□□□□ -0.24
Ube3bQ9ES34 AC134248.1-201ENSMUST00000216113 1176 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms