Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Gm37981-201ENSMUST00000194280 535 ntBASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Gm17831-201ENSMUST00000205579 900 ntBASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Chmp2aQ9DB34 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Gm15549-201ENSMUST00000121595 622 ntBASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Gm9089-201ENSMUST00000122027 526 ntBASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Mir8115-201ENSMUST00000184992 119 ntBASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Gm17825-201ENSMUST00000206836 794 ntBASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.85□□□□□ -0.51
Chmp2aQ9DB34 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Gm22711-201ENSMUST00000116890 133 ntBASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Gm19459-201ENSMUST00000176240 835 ntBASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Gm44008-201ENSMUST00000204345 412 ntBASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Gm10254-201ENSMUST00000052888 867 ntBASIC11.84□□□□□ -0.51
Chmp2aQ9DB34 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms