Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Gm23596-201ENSMUST00000104304 132 ntBASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Gm14058-201ENSMUST00000116082 735 ntBASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Gm19353-201ENSMUST00000184561 445 ntBASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Gm18038-201ENSMUST00000197900 485 ntBASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.85□□□□□ -0.51
Rnf135Q9CWS1 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Gm12857-201ENSMUST00000117678 592 ntBASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Gm5369-201ENSMUST00000217499 588 ntBASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Rnf135Q9CWS1 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Rnf135Q9CWS1 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Rnf135Q9CWS1 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Rnf135Q9CWS1 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC11.83□□□□□ -0.52
Rnf135Q9CWS1 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Rnf135Q9CWS1 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf135Q9CWS1 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf135Q9CWS1 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf135Q9CWS1 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf135Q9CWS1 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf135Q9CWS1 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Rnf135Q9CWS1 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms