Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Gm43916-201ENSMUST00000205062 967 ntBASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Pcdha3Q91Y16 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Gm7150-201ENSMUST00000122032 981 ntBASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Gm20495-201ENSMUST00000173902 235 ntBASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Gm23045-201ENSMUST00000175041 96 ntBASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pcdha3Q91Y16 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pcdha3Q91Y16 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms