Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Pcdhb1Q91Y08 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Gm12165-201ENSMUST00000117047 342 ntBASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Gm15352-201ENSMUST00000118696 270 ntBASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 B9d1os-201ENSMUST00000137010 674 ntBASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 AC166344.1-201ENSMUST00000223745 674 ntBASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Pcdhb1Q91Y08 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Gm13045-201ENSMUST00000119019 712 ntBASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Gm22144-201ENSMUST00000157402 102 ntBASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Gm19353-201ENSMUST00000184561 445 ntBASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Pcdhb1Q91Y08 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Gm6831-202ENSMUST00000213025 1673 ntBASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdhb1Q91Y08 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms