Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC13.19□□□□□ -0.3
StrcQ8VIM6 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Gm16518-201ENSMUST00000117960 508 ntBASIC13.19□□□□□ -0.3
StrcQ8VIM6 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC13.19□□□□□ -0.3
StrcQ8VIM6 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Mir3100-201ENSMUST00000174918 65 ntBASIC13.19□□□□□ -0.3
StrcQ8VIM6 Gm20474-201ENSMUST00000180089 596 ntBASIC13.19□□□□□ -0.3
StrcQ8VIM6 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
StrcQ8VIM6 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Gm38313-201ENSMUST00000191953 1266 ntBASIC13.19□□□□□ -0.3
StrcQ8VIM6 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC13.19□□□□□ -0.3
StrcQ8VIM6 CT009550.1-201ENSMUST00000225750 864 ntBASIC13.19□□□□□ -0.3
StrcQ8VIM6 Gm8615-201ENSMUST00000025307 771 ntBASIC13.19□□□□□ -0.3
StrcQ8VIM6 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Gm9790-201ENSMUST00000054148 288 ntBASIC13.19□□□□□ -0.3
StrcQ8VIM6 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Krtap6-3-201ENSMUST00000079151 444 ntBASIC13.19□□□□□ -0.3
StrcQ8VIM6 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Smarca5-ps-201ENSMUST00000121843 3123 ntBASIC13.19□□□□□ -0.3
StrcQ8VIM6 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
StrcQ8VIM6 Gm24066-201ENSMUST00000104515 131 ntBASIC13.18□□□□□ -0.3
StrcQ8VIM6 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Gm15419-201ENSMUST00000148654 743 ntTSL 3 BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
StrcQ8VIM6 AC154433.1-201ENSMUST00000224401 1183 ntBASIC13.18□□□□□ -0.3
StrcQ8VIM6 Gfra2-203ENSMUST00000227697 1323 ntBASIC13.18□□□□□ -0.3
StrcQ8VIM6 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Gm38034-201ENSMUST00000193915 2069 ntBASIC13.18□□□□□ -0.3
StrcQ8VIM6 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 2700038G22Rik-201ENSMUST00000181574 1375 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Gm22751-201ENSMUST00000102077 109 ntBASIC13.18□□□□□ -0.3
StrcQ8VIM6 Mir692-3-201ENSMUST00000102079 109 ntBASIC13.18□□□□□ -0.3
StrcQ8VIM6 Mir692-2-201ENSMUST00000102081 109 ntBASIC13.18□□□□□ -0.3
StrcQ8VIM6 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Gm13758-201ENSMUST00000118699 743 ntBASIC13.18□□□□□ -0.3
StrcQ8VIM6 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Gm6425-201ENSMUST00000136332 790 ntBASIC13.18□□□□□ -0.3
StrcQ8VIM6 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Gm27675-201ENSMUST00000184527 94 ntBASIC13.18□□□□□ -0.3
StrcQ8VIM6 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC13.18□□□□□ -0.3
StrcQ8VIM6 AC130217.1-201ENSMUST00000224146 909 ntBASIC13.18□□□□□ -0.3
StrcQ8VIM6 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC13.18□□□□□ -0.3
StrcQ8VIM6 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
StrcQ8VIM6 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC13.17□□□□□ -0.3
StrcQ8VIM6 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.17□□□□□ -0.3
StrcQ8VIM6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
StrcQ8VIM6 A1cf-204ENSMUST00000224564 1432 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms