Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Gm36987-201ENSMUST00000194704 2979 ntBASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.54□□□□□ -0.88
H1fooQ8VIK3 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm16481-201ENSMUST00000119074 1227 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm13461-201ENSMUST00000120980 662 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm13263-201ENSMUST00000121271 838 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm17040-202ENSMUST00000170597 889 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm10807-201ENSMUST00000177134 795 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm2383-201ENSMUST00000181461 807 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Mir6420-201ENSMUST00000185032 102 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm4857-201ENSMUST00000192718 785 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm6653-201ENSMUST00000218063 1288 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 AC132446.1-201ENSMUST00000222655 226 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 AC112945.1-201ENSMUST00000226413 514 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
H1fooQ8VIK3 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9.53□□□□□ -0.88
H1fooQ8VIK3 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
H1fooQ8VIK3 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
H1fooQ8VIK3 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
H1fooQ8VIK3 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
H1fooQ8VIK3 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.52□□□□□ -0.88
H1fooQ8VIK3 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC9.52□□□□□ -0.88
H1fooQ8VIK3 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Gm15515-201ENSMUST00000117827 822 ntBASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Gm12579-201ENSMUST00000118040 783 ntBASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Gm8199-201ENSMUST00000121323 823 ntBASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Gm7150-201ENSMUST00000122032 981 ntBASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Gm28450-201ENSMUST00000187349 638 ntBASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Gm4482-201ENSMUST00000200876 742 ntBASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 Gm6108-201ENSMUST00000208365 367 ntBASIC9.52□□□□□ -0.89
H1fooQ8VIK3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.52□□□□□ -0.89
H1fooQ8VIK3 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.52□□□□□ -0.89
H1fooQ8VIK3 CT025694.1-201ENSMUST00000226188 934 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms