Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Trim60Q8VI40 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Gm23949-201ENSMUST00000104027 127 ntBASIC11.76□□□□□ -0.53
Trim60Q8VI40 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Gm14724-201ENSMUST00000118400 537 ntBASIC11.76□□□□□ -0.53
Trim60Q8VI40 Gm8566-201ENSMUST00000120174 465 ntBASIC11.76□□□□□ -0.53
Trim60Q8VI40 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC11.76□□□□□ -0.53
Trim60Q8VI40 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Uba52-ps-201ENSMUST00000183770 379 ntBASIC11.76□□□□□ -0.53
Trim60Q8VI40 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Gm2965-201ENSMUST00000198365 343 ntBASIC11.76□□□□□ -0.53
Trim60Q8VI40 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim60Q8VI40 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.76□□□□□ -0.53
Trim60Q8VI40 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Trim60Q8VI40 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim60Q8VI40 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.76□□□□□ -0.53
Trim60Q8VI40 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.75□□□□□ -0.53
Trim60Q8VI40 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.75□□□□□ -0.53
Trim60Q8VI40 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.75□□□□□ -0.53
Trim60Q8VI40 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC11.75□□□□□ -0.53
Trim60Q8VI40 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.75□□□□□ -0.53
Trim60Q8VI40 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.75□□□□□ -0.53
Trim60Q8VI40 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trim60Q8VI40 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trim60Q8VI40 Gm22323-201ENSMUST00000103832 109 ntBASIC11.74□□□□□ -0.53
Trim60Q8VI40 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms