Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 AC155245.1-201ENSMUST00000222266 1804 ntBASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Gm12463-201ENSMUST00000118271 849 ntBASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Gm15881-201ENSMUST00000148792 942 ntBASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Gm18753-201ENSMUST00000201000 566 ntBASIC13.7□□□□□ -0.22
Brf1Q8CFK2 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 AC102569.1-201ENSMUST00000221563 685 ntBASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Gm5451-201ENSMUST00000080545 579 ntBASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf1Q8CFK2 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.7□□□□□ -0.22
Brf1Q8CFK2 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.69□□□□□ -0.22
Brf1Q8CFK2 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Gm12218-201ENSMUST00000117666 399 ntBASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Gm45118-201ENSMUST00000208928 825 ntBASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.69□□□□□ -0.22
Brf1Q8CFK2 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Gm9826-201ENSMUST00000029124 1299 ntBASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf1Q8CFK2 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Gm13135-201ENSMUST00000117628 3121 ntBASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Gm14585-201ENSMUST00000120713 634 ntBASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Gm29067-201ENSMUST00000190821 470 ntBASIC13.68□□□□□ -0.22
Brf1Q8CFK2 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms