Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Ankrd1-201ENSMUST00000025718 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gm43999-201ENSMUST00000204286 2889 ntBASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gm12463-201ENSMUST00000118271 849 ntBASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gm13263-201ENSMUST00000121271 838 ntBASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gm23085-201ENSMUST00000157849 293 ntBASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gm4482-201ENSMUST00000200876 742 ntBASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gm6108-201ENSMUST00000208365 367 ntBASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gm21811-201ENSMUST00000096485 930 ntBASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gm21039-201ENSMUST00000223359 2012 ntBASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ccdc38Q8CDN8 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Gm8199-201ENSMUST00000121323 823 ntBASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ccdc38Q8CDN8 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Mir877-201ENSMUST00000104738 85 ntBASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Gm13916-201ENSMUST00000117368 628 ntBASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Gm15515-201ENSMUST00000117827 822 ntBASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Gm13461-201ENSMUST00000120980 662 ntBASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc38Q8CDN8 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms