Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Gm18539-201ENSMUST00000204745 1090 ntBASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Gm29245-201ENSMUST00000187332 1416 ntBASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Usp44Q8C2S0 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Usp44Q8C2S0 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usp44Q8C2S0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usp44Q8C2S0 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usp44Q8C2S0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usp44Q8C2S0 Gm36987-201ENSMUST00000194704 2979 ntBASIC13.27□□□□□ -0.28
Usp44Q8C2S0 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usp44Q8C2S0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Usp44Q8C2S0 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.27□□□□□ -0.28
Usp44Q8C2S0 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Usp44Q8C2S0 AC122273.1-201ENSMUST00000213634 2327 ntBASIC13.27□□□□□ -0.28
Usp44Q8C2S0 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Gm27910-201ENSMUST00000185004 107 ntBASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Gm43947-201ENSMUST00000203019 959 ntBASIC13.27□□□□□ -0.29
Usp44Q8C2S0 AC125486.1-201ENSMUST00000218701 320 ntBASIC13.27□□□□□ -0.29
Usp44Q8C2S0 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Gm8899-201ENSMUST00000214635 1332 ntBASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Usp44Q8C2S0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.26□□□□□ -0.29
Usp44Q8C2S0 AC149588.2-201ENSMUST00000228182 1859 ntBASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Usp44Q8C2S0 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Gm6485-201ENSMUST00000160676 439 ntBASIC13.25□□□□□ -0.29
Usp44Q8C2S0 Gm19015-201ENSMUST00000184002 1189 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms