Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Ska3Q8C263 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska3Q8C263 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
Ska3Q8C263 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC10.73□□□□□ -0.69
Ska3Q8C263 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.73□□□□□ -0.69
Ska3Q8C263 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ska3Q8C263 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Gm13611-201ENSMUST00000118269 318 ntBASIC10.73□□□□□ -0.69
Ska3Q8C263 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.73□□□□□ -0.69
Ska3Q8C263 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.73□□□□□ -0.69
Ska3Q8C263 Gm8737-201ENSMUST00000122208 642 ntBASIC10.73□□□□□ -0.69
Ska3Q8C263 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.73□□□□□ -0.69
Ska3Q8C263 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Ska3Q8C263 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.73□□□□□ -0.69
Ska3Q8C263 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.73□□□□□ -0.69
Ska3Q8C263 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.73□□□□□ -0.69
Ska3Q8C263 Gm18753-201ENSMUST00000201000 566 ntBASIC10.73□□□□□ -0.69
Ska3Q8C263 Gm17831-201ENSMUST00000205579 900 ntBASIC10.73□□□□□ -0.69
Ska3Q8C263 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.73□□□□□ -0.69
Ska3Q8C263 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Gm8420-201ENSMUST00000097103 598 ntBASIC10.73□□□□□ -0.69
Ska3Q8C263 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.73□□□□□ -0.69
Ska3Q8C263 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.73□□□□□ -0.69
Ska3Q8C263 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.73□□□□□ -0.69
Ska3Q8C263 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.73□□□□□ -0.69
Ska3Q8C263 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC10.73□□□□□ -0.69
Ska3Q8C263 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Ska3Q8C263 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Ska3Q8C263 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Ska3Q8C263 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Ska3Q8C263 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Ska3Q8C263 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ska3Q8C263 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.72□□□□□ -0.69
Ska3Q8C263 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Ska3Q8C263 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ska3Q8C263 Gm23045-201ENSMUST00000175041 96 ntBASIC10.72□□□□□ -0.69
Ska3Q8C263 Gm7741-201ENSMUST00000181445 989 ntBASIC10.72□□□□□ -0.69
Ska3Q8C263 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.72□□□□□ -0.69
Ska3Q8C263 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.72□□□□□ -0.69
Ska3Q8C263 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Ska3Q8C263 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ska3Q8C263 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.72□□□□□ -0.69
Ska3Q8C263 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Ska3Q8C263 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.72□□□□□ -0.69
Ska3Q8C263 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Ska3Q8C263 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms