Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Gm9035-201ENSMUST00000218318 1697 ntBASIC12.13□□□□□ -0.47
Nucks1Q80XU3 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Gm24891-201ENSMUST00000104391 136 ntBASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Gm12247-201ENSMUST00000117585 670 ntBASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Gm29499-201ENSMUST00000189151 486 ntBASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Gm28329-201ENSMUST00000191208 689 ntBASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Gm29171-201ENSMUST00000191397 486 ntBASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Gm9353-201ENSMUST00000200472 604 ntBASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.13□□□□□ -0.47
Nucks1Q80XU3 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Gm14017-201ENSMUST00000121934 386 ntBASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Gm45856-201ENSMUST00000212752 416 ntBASIC12.12□□□□□ -0.47
Nucks1Q80XU3 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.12□□□□□ -0.47
Nucks1Q80XU3 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Nucks1Q80XU3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Nucks1Q80XU3 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Nucks1Q80XU3 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nucks1Q80XU3 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC12.11□□□□□ -0.47
Nucks1Q80XU3 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.11□□□□□ -0.47
Nucks1Q80XU3 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nucks1Q80XU3 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nucks1Q80XU3 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nucks1Q80XU3 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nucks1Q80XU3 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nucks1Q80XU3 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Nucks1Q80XU3 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms