Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Gm44315-201ENSMUST00000203041 219 ntBASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.37□□□□□ -0.59
Rpp38Q80UU2 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.37□□□□□ -0.59
Rpp38Q80UU2 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.37□□□□□ -0.59
Rpp38Q80UU2 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Gm23105-201ENSMUST00000083719 134 ntBASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpp38Q80UU2 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Gm16166-201ENSMUST00000118291 787 ntBASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Gm11331-201ENSMUST00000119764 288 ntBASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Gm13408-201ENSMUST00000119822 798 ntBASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Gm13935-201ENSMUST00000121859 798 ntBASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Gm15881-201ENSMUST00000148792 942 ntBASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Gm24992-201ENSMUST00000157412 130 ntBASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Gm5468-202ENSMUST00000227851 682 ntBASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Gm43972-201ENSMUST00000181398 1467 ntBASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpp38Q80UU2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Gm13611-201ENSMUST00000118269 318 ntBASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Gm14942-201ENSMUST00000119642 336 ntBASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Gm14585-201ENSMUST00000120713 634 ntBASIC11.35□□□□□ -0.59
Rpp38Q80UU2 Mir6979-201ENSMUST00000183927 56 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms