Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.94□□□□□ -0.66
ClpbQ60649 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Gm15131-201ENSMUST00000119124 595 ntBASIC10.94□□□□□ -0.66
ClpbQ60649 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Gm15595-201ENSMUST00000120840 961 ntBASIC10.94□□□□□ -0.66
ClpbQ60649 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.94□□□□□ -0.66
ClpbQ60649 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.94□□□□□ -0.66
ClpbQ60649 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC10.94□□□□□ -0.66
ClpbQ60649 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC10.94□□□□□ -0.66
ClpbQ60649 Gm7666-201ENSMUST00000146631 819 ntBASIC10.94□□□□□ -0.66
ClpbQ60649 Gm24514-201ENSMUST00000174961 285 ntBASIC10.94□□□□□ -0.66
ClpbQ60649 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.94□□□□□ -0.66
ClpbQ60649 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.94□□□□□ -0.66
ClpbQ60649 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.94□□□□□ -0.66
ClpbQ60649 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.94□□□□□ -0.66
ClpbQ60649 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Gm7940-201ENSMUST00000218195 769 ntBASIC10.94□□□□□ -0.66
ClpbQ60649 Gm6867-201ENSMUST00000219165 425 ntBASIC10.94□□□□□ -0.66
ClpbQ60649 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.94□□□□□ -0.66
ClpbQ60649 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.94□□□□□ -0.66
ClpbQ60649 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.94□□□□□ -0.66
ClpbQ60649 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
ClpbQ60649 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
ClpbQ60649 BC043934-202ENSMUST00000185694 2356 ntBASIC10.94□□□□□ -0.66
ClpbQ60649 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
ClpbQ60649 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
ClpbQ60649 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.93□□□□□ -0.66
ClpbQ60649 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Gm43081-201ENSMUST00000199082 1380 ntBASIC10.93□□□□□ -0.66
ClpbQ60649 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Gm8731-201ENSMUST00000118088 412 ntBASIC10.93□□□□□ -0.66
ClpbQ60649 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC10.93□□□□□ -0.66
ClpbQ60649 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Gm22144-201ENSMUST00000157402 102 ntBASIC10.93□□□□□ -0.66
ClpbQ60649 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC10.93□□□□□ -0.66
ClpbQ60649 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Gm38151-201ENSMUST00000195085 289 ntBASIC10.93□□□□□ -0.66
ClpbQ60649 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.93□□□□□ -0.66
ClpbQ60649 Gm43916-201ENSMUST00000205062 967 ntBASIC10.93□□□□□ -0.66
ClpbQ60649 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC10.93□□□□□ -0.66
ClpbQ60649 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Gm18065-201ENSMUST00000221395 526 ntBASIC10.93□□□□□ -0.66
ClpbQ60649 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
ClpbQ60649 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
ClpbQ60649 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.93□□□□□ -0.66
ClpbQ60649 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
ClpbQ60649 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.93□□□□□ -0.66
ClpbQ60649 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
ClpbQ60649 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
ClpbQ60649 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms