Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim43aQ3TL54 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Gm2383-201ENSMUST00000181461 807 ntBASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Gm44967-201ENSMUST00000207047 631 ntBASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim43aQ3TL54 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Gm12012-201ENSMUST00000118857 1066 ntBASIC12.06□□□□□ -0.48
Trim43aQ3TL54 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Igkv2-116-201ENSMUST00000199327 362 ntBASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim43aQ3TL54 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.05□□□□□ -0.48
Trim43aQ3TL54 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms