Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Gm22763-201ENSMUST00000158374 107 ntBASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Gm37860-201ENSMUST00000195380 1034 ntBASIC15.8■□□□□ 0.12
Trpm1Q2TV84 AC154461.3-201ENSMUST00000224831 573 ntBASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Trpm1Q2TV84 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Gm14699-201ENSMUST00000122340 228 ntBASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Gm28179-201ENSMUST00000188365 613 ntBASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Gm17541-201ENSMUST00000080062 525 ntBASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Gm5244-201ENSMUST00000164001 339 ntBASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Gm42803-201ENSMUST00000201051 451 ntBASIC15.79■□□□□ 0.12
Trpm1Q2TV84 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trpm1Q2TV84 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Gm38312-201ENSMUST00000195426 1746 ntBASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Fam220-ps-201ENSMUST00000116535 783 ntBASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Gm16518-201ENSMUST00000117960 508 ntBASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Gm38313-201ENSMUST00000191953 1266 ntBASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Gm18122-201ENSMUST00000211390 904 ntBASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Gm18391-201ENSMUST00000217189 658 ntBASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Gm8420-201ENSMUST00000097103 598 ntBASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Xaf1-204ENSMUST00000146233 2597 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trpm1Q2TV84 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms