Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC11.64□□□□□ -0.55
Col9a1Q05722 Gm8023-201ENSMUST00000195298 903 ntBASIC11.64□□□□□ -0.55
Col9a1Q05722 Gm45090-201ENSMUST00000208775 1148 ntBASIC11.64□□□□□ -0.55
Col9a1Q05722 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Col9a1Q05722 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Gm42970-201ENSMUST00000196407 1352 ntBASIC11.64□□□□□ -0.55
Col9a1Q05722 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Col9a1Q05722 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Col9a1Q05722 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Col9a1Q05722 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Col9a1Q05722 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Snx7-205ENSMUST00000198499 1314 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Col9a1Q05722 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Col9a1Q05722 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.63□□□□□ -0.55
Col9a1Q05722 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.63□□□□□ -0.55
Col9a1Q05722 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col9a1Q05722 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Col9a1Q05722 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Mir453-201ENSMUST00000104732 82 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 Gm12731-201ENSMUST00000120932 268 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 Gm25554-201ENSMUST00000158075 113 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC11.63□□□□□ -0.55
Col9a1Q05722 Mir3091-201ENSMUST00000175086 76 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 Gm25872-201ENSMUST00000177784 100 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 Gm8604-201ENSMUST00000183150 965 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Col9a1Q05722 AC241616.1-201ENSMUST00000213741 166 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 Gm10688-201ENSMUST00000214985 520 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 CT009728.1-201ENSMUST00000225228 1050 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 AC153153.1-201ENSMUST00000225803 793 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col9a1Q05722 Gm16477-201ENSMUST00000085365 801 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Col9a1Q05722 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Col9a1Q05722 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Col9a1Q05722 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.63□□□□□ -0.55
Col9a1Q05722 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Col9a1Q05722 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Col9a1Q05722 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC11.62□□□□□ -0.55
Col9a1Q05722 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Col9a1Q05722 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Col9a1Q05722 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Col9a1Q05722 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Col9a1Q05722 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 AC131120.1-201ENSMUST00000217728 1617 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm24933-201ENSMUST00000103762 110 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm23252-201ENSMUST00000103776 110 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm14599-201ENSMUST00000120469 474 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm15570-201ENSMUST00000122093 625 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm12052-201ENSMUST00000142151 933 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.62□□□□□ -0.55
Col9a1Q05722 Gm23432-201ENSMUST00000157181 131 ntBASIC11.62□□□□□ -0.55
Col9a1Q05722 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col9a1Q05722 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Col9a1Q05722 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms