Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC9.78□□□□□ -0.84
Col8a1Q00780 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 AC174797.1-201ENSMUST00000224339 1649 ntBASIC9.78□□□□□ -0.84
Col8a1Q00780 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.78□□□□□ -0.84
Col8a1Q00780 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Col8a1Q00780 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Col8a1Q00780 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Col8a1Q00780 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Col8a1Q00780 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Col8a1Q00780 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Col8a1Q00780 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Col8a1Q00780 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Col8a1Q00780 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
Col8a1Q00780 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Col8a1Q00780 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.84
Col8a1Q00780 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC9.77□□□□□ -0.85
Col8a1Q00780 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Col8a1Q00780 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Col8a1Q00780 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm12461-201ENSMUST00000120231 1239 ntBASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Col8a1Q00780 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm5706-201ENSMUST00000181525 993 ntBASIC9.77□□□□□ -0.85
Col8a1Q00780 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm44044-201ENSMUST00000205178 1089 ntBASIC9.77□□□□□ -0.85
Col8a1Q00780 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm17931-201ENSMUST00000208132 634 ntBASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm45484-201ENSMUST00000210310 1141 ntBASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm45310-201ENSMUST00000210436 275 ntBASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC9.77□□□□□ -0.85
Col8a1Q00780 AC164087.2-201ENSMUST00000216206 1072 ntBASIC9.77□□□□□ -0.85
Col8a1Q00780 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 AC162932.1-201ENSMUST00000219209 872 ntBASIC9.77□□□□□ -0.85
Col8a1Q00780 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC9.77□□□□□ -0.85
Col8a1Q00780 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm5468-202ENSMUST00000227851 682 ntBASIC9.77□□□□□ -0.85
Col8a1Q00780 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Gm45251-201ENSMUST00000209486 1465 ntBASIC9.77□□□□□ -0.85
Col8a1Q00780 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Col8a1Q00780 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC9.77□□□□□ -0.85
Col8a1Q00780 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC9.76□□□□□ -0.85
Col8a1Q00780 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Col8a1Q00780 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Col8a1Q00780 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.76□□□□□ -0.85
Col8a1Q00780 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Col8a1Q00780 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC9.76□□□□□ -0.85
Col8a1Q00780 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Col8a1Q00780 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.76□□□□□ -0.85
Col8a1Q00780 Gm45094-201ENSMUST00000207013 617 ntBASIC9.76□□□□□ -0.85
Col8a1Q00780 Gm2448-201ENSMUST00000207080 559 ntBASIC9.76□□□□□ -0.85
Col8a1Q00780 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC9.76□□□□□ -0.85
Col8a1Q00780 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC9.76□□□□□ -0.85
Col8a1Q00780 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC9.76□□□□□ -0.85
Col8a1Q00780 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.76□□□□□ -0.85
Col8a1Q00780 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.76□□□□□ -0.85
Col8a1Q00780 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Col8a1Q00780 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms