Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC12.38□□□□□ -0.43
Trim43cP86449 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.38□□□□□ -0.43
Trim43cP86449 Mir6979-201ENSMUST00000183927 56 ntBASIC12.38□□□□□ -0.43
Trim43cP86449 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim43cP86449 Gm37981-201ENSMUST00000194280 535 ntBASIC12.38□□□□□ -0.43
Trim43cP86449 Gm42790-201ENSMUST00000201268 969 ntBASIC12.38□□□□□ -0.43
Trim43cP86449 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.38□□□□□ -0.43
Trim43cP86449 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim43cP86449 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim43cP86449 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.38□□□□□ -0.43
Trim43cP86449 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim43cP86449 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim43cP86449 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim43cP86449 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim43cP86449 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim43cP86449 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trim43cP86449 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim43cP86449 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Gm15615-201ENSMUST00000118876 198 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Gm15573-201ENSMUST00000119487 540 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Gm8737-201ENSMUST00000122208 642 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim43cP86449 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Gm10051-201ENSMUST00000145209 414 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Gm26461-201ENSMUST00000175064 290 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Gm7741-201ENSMUST00000181445 989 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.37□□□□□ -0.43
Trim43cP86449 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.37□□□□□ -0.43
Trim43cP86449 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim43cP86449 Gm44100-201ENSMUST00000204329 436 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Gm45398-201ENSMUST00000210561 165 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Gm5451-201ENSMUST00000080545 579 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.37□□□□□ -0.43
Trim43cP86449 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trim43cP86449 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Trim43cP86449 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trim43cP86449 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.37□□□□□ -0.43
Trim43cP86449 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.37□□□□□ -0.43
Trim43cP86449 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trim43cP86449 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms