Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.58□□□□□ -0.4
Hmgb1P63158 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hmgb1P63158 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgb1P63158 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgb1P63158 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgb1P63158 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgb1P63158 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgb1P63158 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgb1P63158 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hmgb1P63158 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.57□□□□□ -0.4
Hmgb1P63158 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.57□□□□□ -0.4
Hmgb1P63158 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.57□□□□□ -0.4
Hmgb1P63158 Gm25881-201ENSMUST00000157783 103 ntBASIC12.57□□□□□ -0.4
Hmgb1P63158 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Hmgb1P63158 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Hmgb1P63158 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.57□□□□□ -0.4
Hmgb1P63158 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC12.57□□□□□ -0.4
Hmgb1P63158 Gm7003-201ENSMUST00000195089 312 ntBASIC12.57□□□□□ -0.4
Hmgb1P63158 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.57□□□□□ -0.4
Hmgb1P63158 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.57□□□□□ -0.4
Hmgb1P63158 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.57□□□□□ -0.4
Hmgb1P63158 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgb1P63158 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hmgb1P63158 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgb1P63158 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hmgb1P63158 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgb1P63158 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgb1P63158 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgb1P63158 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgb1P63158 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgb1P63158 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hmgb1P63158 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.56□□□□□ -0.4
Hmgb1P63158 Gm29245-201ENSMUST00000187332 1416 ntBASIC12.56□□□□□ -0.4
Hmgb1P63158 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hmgb1P63158 Gm45416-201ENSMUST00000209713 2201 ntBASIC12.56□□□□□ -0.4
Hmgb1P63158 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.56□□□□□ -0.4
Hmgb1P63158 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Gm12129-201ENSMUST00000120104 1147 ntBASIC12.56□□□□□ -0.4
Hmgb1P63158 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.56□□□□□ -0.4
Hmgb1P63158 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Hmgb1P63158 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.56□□□□□ -0.4
Hmgb1P63158 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Hmgb1P63158 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.56□□□□□ -0.4
Hmgb1P63158 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Gm18730-201ENSMUST00000218038 343 ntBASIC12.56□□□□□ -0.4
Hmgb1P63158 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hmgb1P63158 Slc25a45-201ENSMUST00000025732 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.56□□□□□ -0.4
Hmgb1P63158 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.56□□□□□ -0.4
Hmgb1P63158 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Hmgb1P63158 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hmgb1P63158 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Hmgb1P63158 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Hmgb1P63158 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hmgb1P63158 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.55□□□□□ -0.4
Hmgb1P63158 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Hmgb1P63158 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.55□□□□□ -0.4
Hmgb1P63158 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Hmgb1P63158 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.55□□□□□ -0.4
Hmgb1P63158 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hmgb1P63158 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hmgb1P63158 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC12.55□□□□□ -0.4
Hmgb1P63158 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hmgb1P63158 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms