Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Lsm3P62311 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Lsm3P62311 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Ppm1f-201ENSMUST00000027373 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Ciapin1-209ENSMUST00000162538 4359 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Lsm3P62311 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Lsm3P62311 Gm14150-201ENSMUST00000122404 1354 ntBASIC10.27□□□□□ -0.76
Lsm3P62311 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Lsm3P62311 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Lsm3P62311 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Lsm3P62311 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.27□□□□□ -0.76
Lsm3P62311 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Lsm3P62311 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.27□□□□□ -0.77
Lsm3P62311 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Lsm3P62311 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.27□□□□□ -0.77
Lsm3P62311 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Lsm3P62311 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.27□□□□□ -0.77
Lsm3P62311 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.27□□□□□ -0.77
Lsm3P62311 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Gm8652-201ENSMUST00000181363 964 ntBASIC10.27□□□□□ -0.77
Lsm3P62311 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.27□□□□□ -0.77
Lsm3P62311 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.27□□□□□ -0.77
Lsm3P62311 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC10.27□□□□□ -0.77
Lsm3P62311 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.27□□□□□ -0.77
Lsm3P62311 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.27□□□□□ -0.77
Lsm3P62311 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC10.27□□□□□ -0.77
Lsm3P62311 Gm45668-201ENSMUST00000211271 493 ntBASIC10.27□□□□□ -0.77
Lsm3P62311 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Lsm3P62311 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.27□□□□□ -0.77
Lsm3P62311 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.27□□□□□ -0.77
Lsm3P62311 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.27□□□□□ -0.77
Lsm3P62311 Gm10268-201ENSMUST00000085340 555 ntBASIC10.27□□□□□ -0.77
Lsm3P62311 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 4930417O13Rik-203ENSMUST00000204911 3458 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Lsm3P62311 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.27□□□□□ -0.77
Lsm3P62311 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC10.27□□□□□ -0.77
Lsm3P62311 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC10.27□□□□□ -0.77
Lsm3P62311 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC10.27□□□□□ -0.77
Lsm3P62311 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC10.27□□□□□ -0.77
Lsm3P62311 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Lsm3P62311 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Lsm3P62311 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC10.27□□□□□ -0.77
Lsm3P62311 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Itgax-201ENSMUST00000033053 4046 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Git2-203ENSMUST00000112183 4886 ntTSL 5 BASIC10.27□□□□□ -0.77
Lsm3P62311 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Lsm3P62311 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Lsm3P62311 5730455P16Rik-204ENSMUST00000179332 4536 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Lsm3P62311 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
Lsm3P62311 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Lsm3P62311 Apobr-201ENSMUST00000039522 3685 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
Lsm3P62311 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.26□□□□□ -0.77
Lsm3P62311 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Fut10-201ENSMUST00000066173 3183 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Gm13875-201ENSMUST00000120162 282 ntBASIC10.26□□□□□ -0.77
Lsm3P62311 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.26□□□□□ -0.77
Lsm3P62311 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC10.26□□□□□ -0.77
Lsm3P62311 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC10.26□□□□□ -0.77
Lsm3P62311 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.26□□□□□ -0.77
Lsm3P62311 Gm44872-201ENSMUST00000207864 420 ntBASIC10.26□□□□□ -0.77
Lsm3P62311 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Lsm3P62311 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms