Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm28302-201ENSMUST00000187931 697 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Gm28646-201ENSMUST00000188220 697 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Gm28205-201ENSMUST00000189177 697 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Gm29032-201ENSMUST00000189797 697 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Gm28695-201ENSMUST00000190300 697 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Gm37448-201ENSMUST00000192795 697 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Gm37666-201ENSMUST00000194110 866 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Gm44967-201ENSMUST00000207047 631 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Gm8913-201ENSMUST00000209491 641 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.82□□□□□ -0.36
Rrp1P56183 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Gm6722-201ENSMUST00000221586 390 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.82□□□□□ -0.36
Rrp1P56183 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.82□□□□□ -0.36
Rrp1P56183 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rrp1P56183 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rrp1P56183 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rrp1P56183 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Rrp1P56183 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.82□□□□□ -0.36
Rrp1P56183 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Rrp1P56183 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rrp1P56183 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.81□□□□□ -0.36
Rrp1P56183 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rrp1P56183 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.81□□□□□ -0.36
Rrp1P56183 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.81□□□□□ -0.36
Rrp1P56183 Gm8459-201ENSMUST00000162504 760 ntBASIC12.81□□□□□ -0.36
Rrp1P56183 Gm8815-201ENSMUST00000173809 620 ntBASIC12.81□□□□□ -0.36
Rrp1P56183 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.81□□□□□ -0.36
Rrp1P56183 Gm27530-201ENSMUST00000184096 98 ntBASIC12.81□□□□□ -0.36
Rrp1P56183 Mir7677-201ENSMUST00000184226 67 ntBASIC12.81□□□□□ -0.36
Rrp1P56183 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Gm3332-201ENSMUST00000189337 928 ntBASIC12.81□□□□□ -0.36
Rrp1P56183 Gm18038-201ENSMUST00000197900 485 ntBASIC12.81□□□□□ -0.36
Rrp1P56183 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.81□□□□□ -0.36
Rrp1P56183 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.81□□□□□ -0.36
Rrp1P56183 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.81□□□□□ -0.36
Rrp1P56183 Gm6867-201ENSMUST00000219165 425 ntBASIC12.81□□□□□ -0.36
Rrp1P56183 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.81□□□□□ -0.36
Rrp1P56183 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Rrp1P56183 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rrp1P56183 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Gm28424-201ENSMUST00000187393 1319 ntBASIC12.81□□□□□ -0.36
Rrp1P56183 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rrp1P56183 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Rrp1P56183 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.81□□□□□ -0.36
Rrp1P56183 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Rrp1P56183 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.8□□□□□ -0.36
Rrp1P56183 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Rrp1P56183 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Rrp1P56183 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.8□□□□□ -0.36
Rrp1P56183 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.8□□□□□ -0.36
Rrp1P56183 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Rrp1P56183 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.8□□□□□ -0.36
Rrp1P56183 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Rrp1P56183 Gm12857-201ENSMUST00000117678 592 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms