Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh2P43247 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh2P43247 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh2P43247 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Msh2P43247 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Msh2P43247 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Msh2P43247 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.73□□□□□ -0.53
Msh2P43247 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.73□□□□□ -0.53
Msh2P43247 Gm15004-201ENSMUST00000119192 630 ntBASIC11.73□□□□□ -0.53
Msh2P43247 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Msh2P43247 Gm11660-201ENSMUST00000120955 412 ntBASIC11.73□□□□□ -0.53
Msh2P43247 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.73□□□□□ -0.53
Msh2P43247 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.73□□□□□ -0.53
Msh2P43247 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.73□□□□□ -0.53
Msh2P43247 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.73□□□□□ -0.53
Msh2P43247 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Msh2P43247 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Msh2P43247 Gm16505-201ENSMUST00000179981 232 ntBASIC11.73□□□□□ -0.53
Msh2P43247 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Msh2P43247 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.73□□□□□ -0.53
Msh2P43247 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Msh2P43247 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.73□□□□□ -0.53
Msh2P43247 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.73□□□□□ -0.53
Msh2P43247 CT025694.1-201ENSMUST00000226188 934 ntBASIC11.73□□□□□ -0.53
Msh2P43247 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Msh2P43247 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Msh2P43247 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Msh2P43247 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Msh2P43247 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Msh2P43247 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.72□□□□□ -0.53
Msh2P43247 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Msh2P43247 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Msh2P43247 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.72□□□□□ -0.53
Msh2P43247 Gm11509-201ENSMUST00000117358 325 ntBASIC11.72□□□□□ -0.53
Msh2P43247 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.72□□□□□ -0.53
Msh2P43247 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.72□□□□□ -0.53
Msh2P43247 Gm17040-202ENSMUST00000170597 889 ntBASIC11.72□□□□□ -0.53
Msh2P43247 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Gm19287-201ENSMUST00000203190 358 ntBASIC11.72□□□□□ -0.53
Msh2P43247 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Msh2P43247 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Msh2P43247 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Msh2P43247 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh2P43247 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.71□□□□□ -0.53
Msh2P43247 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.71□□□□□ -0.53
Msh2P43247 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Msh2P43247 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Msh2P43247 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh2P43247 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Msh2P43247 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Msh2P43247 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Msh2P43247 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.71□□□□□ -0.53
Msh2P43247 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms