Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfsf9P41274 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.91□□□□□ -0.66
Tnfsf9P41274 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Gm12795-201ENSMUST00000117594 539 ntBASIC10.91□□□□□ -0.66
Tnfsf9P41274 Gm12899-201ENSMUST00000120565 551 ntBASIC10.91□□□□□ -0.66
Tnfsf9P41274 Mir1901-201ENSMUST00000122616 78 ntBASIC10.91□□□□□ -0.66
Tnfsf9P41274 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Gm23153-201ENSMUST00000175323 313 ntBASIC10.91□□□□□ -0.66
Tnfsf9P41274 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Mir7051-201ENSMUST00000184167 73 ntBASIC10.91□□□□□ -0.66
Tnfsf9P41274 Gm28388-201ENSMUST00000186262 437 ntBASIC10.91□□□□□ -0.66
Tnfsf9P41274 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.91□□□□□ -0.66
Tnfsf9P41274 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.91□□□□□ -0.66
Tnfsf9P41274 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.91□□□□□ -0.66
Tnfsf9P41274 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Tnfsf9P41274 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.9□□□□□ -0.66
Tnfsf9P41274 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Gm14892-201ENSMUST00000117636 267 ntBASIC10.9□□□□□ -0.66
Tnfsf9P41274 Gm14395-201ENSMUST00000120494 563 ntBASIC10.9□□□□□ -0.66
Tnfsf9P41274 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Gm8531-201ENSMUST00000188319 893 ntBASIC10.9□□□□□ -0.66
Tnfsf9P41274 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Gm38210-201ENSMUST00000191944 809 ntBASIC10.9□□□□□ -0.66
Tnfsf9P41274 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Gm45594-201ENSMUST00000211717 241 ntBASIC10.9□□□□□ -0.66
Tnfsf9P41274 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.9□□□□□ -0.66
Tnfsf9P41274 AC165154.1-201ENSMUST00000226661 340 ntBASIC10.9□□□□□ -0.66
Tnfsf9P41274 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.9□□□□□ -0.66
Tnfsf9P41274 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.9□□□□□ -0.66
Tnfsf9P41274 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Tnfsf9P41274 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms