Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Sox6P40645 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Sox6P40645 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox6P40645 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Sox6P40645 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox6P40645 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.71□□□□□ -0.7
Sox6P40645 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Sox6P40645 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox6P40645 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox6P40645 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox6P40645 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Sox6P40645 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Sox6P40645 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Sox6P40645 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.71□□□□□ -0.7
Sox6P40645 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC10.7□□□□□ -0.7
Sox6P40645 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.7□□□□□ -0.7
Sox6P40645 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.7□□□□□ -0.7
Sox6P40645 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sox6P40645 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.7□□□□□ -0.7
Sox6P40645 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sox6P40645 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.7□□□□□ -0.7
Sox6P40645 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Sox6P40645 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.7□□□□□ -0.7
Sox6P40645 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC10.7□□□□□ -0.7
Sox6P40645 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC10.7□□□□□ -0.7
Sox6P40645 Gm14277-201ENSMUST00000121195 360 ntBASIC10.7□□□□□ -0.7
Sox6P40645 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.7□□□□□ -0.7
Sox6P40645 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.7□□□□□ -0.7
Sox6P40645 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Mir7677-201ENSMUST00000184226 67 ntBASIC10.7□□□□□ -0.7
Sox6P40645 Gm2260-201ENSMUST00000184965 657 ntBASIC10.7□□□□□ -0.7
Sox6P40645 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.7□□□□□ -0.7
Sox6P40645 Gm18893-201ENSMUST00000198416 943 ntBASIC10.7□□□□□ -0.7
Sox6P40645 Gm4157-201ENSMUST00000211647 679 ntBASIC10.7□□□□□ -0.7
Sox6P40645 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.7□□□□□ -0.7
Sox6P40645 Gm18730-201ENSMUST00000218038 343 ntBASIC10.7□□□□□ -0.7
Sox6P40645 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC10.7□□□□□ -0.7
Sox6P40645 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Sox6P40645 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Sox6P40645 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.69□□□□□ -0.7
Sox6P40645 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.69□□□□□ -0.7
Sox6P40645 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.69□□□□□ -0.7
Sox6P40645 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sox6P40645 Gm26286-201ENSMUST00000104166 134 ntBASIC10.69□□□□□ -0.7
Sox6P40645 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sox6P40645 Gm11660-201ENSMUST00000120955 412 ntBASIC10.69□□□□□ -0.7
Sox6P40645 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.69□□□□□ -0.7
Sox6P40645 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.69□□□□□ -0.7
Sox6P40645 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.69□□□□□ -0.7
Sox6P40645 Gm18038-201ENSMUST00000197900 485 ntBASIC10.69□□□□□ -0.7
Sox6P40645 Igkv2-116-201ENSMUST00000199327 362 ntBASIC10.69□□□□□ -0.7
Sox6P40645 Gm19287-201ENSMUST00000203190 358 ntBASIC10.69□□□□□ -0.7
Sox6P40645 Gm45186-201ENSMUST00000206874 478 ntBASIC10.69□□□□□ -0.7
Sox6P40645 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.69□□□□□ -0.7
Sox6P40645 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms