Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Gm15566-201ENSMUST00000121130 590 ntBASIC10.56□□□□□ -0.72
Cd40lgP27548 Gm8199-201ENSMUST00000121323 823 ntBASIC10.56□□□□□ -0.72
Cd40lgP27548 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.56□□□□□ -0.72
Cd40lgP27548 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.56□□□□□ -0.72
Cd40lgP27548 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.56□□□□□ -0.72
Cd40lgP27548 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.56□□□□□ -0.72
Cd40lgP27548 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Cd40lgP27548 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cd40lgP27548 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.55□□□□□ -0.72
Cd40lgP27548 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cd40lgP27548 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cd40lgP27548 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cd40lgP27548 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Cd40lgP27548 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cd40lgP27548 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm23251-201ENSMUST00000103773 110 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm14441-201ENSMUST00000121960 540 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.55□□□□□ -0.72
Cd40lgP27548 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm4310-201ENSMUST00000177847 889 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm28937-201ENSMUST00000185413 695 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm29400-201ENSMUST00000187208 695 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm28662-201ENSMUST00000188446 695 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm10774-201ENSMUST00000188689 204 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm28251-201ENSMUST00000188835 695 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm37318-201ENSMUST00000194325 695 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm38017-201ENSMUST00000194768 695 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm37287-201ENSMUST00000195449 695 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm37793-201ENSMUST00000195548 695 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.55□□□□□ -0.72
Cd40lgP27548 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm18393-201ENSMUST00000208349 1131 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm6108-201ENSMUST00000208365 367 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cd40lgP27548 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Gm45828-201ENSMUST00000206938 1836 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.55□□□□□ -0.72
Cd40lgP27548 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cd40lgP27548 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cd40lgP27548 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cd40lgP27548 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms