Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm19015-201ENSMUST00000184002 1189 ntBASIC16.9■□□□□ 0.3
NclP09405 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC16.9■□□□□ 0.3
NclP09405 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
NclP09405 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
NclP09405 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NclP09405 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NclP09405 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
NclP09405 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NclP09405 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NclP09405 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
NclP09405 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NclP09405 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC16.89■□□□□ 0.29
NclP09405 Gm14270-201ENSMUST00000118388 846 ntBASIC16.89■□□□□ 0.29
NclP09405 Gm14219-201ENSMUST00000120414 288 ntBASIC16.89■□□□□ 0.29
NclP09405 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NclP09405 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC16.89■□□□□ 0.29
NclP09405 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NclP09405 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NclP09405 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NclP09405 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
NclP09405 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC16.89■□□□□ 0.29
NclP09405 Gm3671-201ENSMUST00000182463 1007 ntBASIC16.89■□□□□ 0.29
NclP09405 Gm29067-201ENSMUST00000190821 470 ntBASIC16.89■□□□□ 0.29
NclP09405 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC16.89■□□□□ 0.29
NclP09405 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NclP09405 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC16.89■□□□□ 0.29
NclP09405 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC16.89■□□□□ 0.29
NclP09405 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC16.89■□□□□ 0.29
NclP09405 AC129308.3-201ENSMUST00000225652 524 ntBASIC16.89■□□□□ 0.29
NclP09405 CT025602.2-201ENSMUST00000226553 772 ntBASIC16.89■□□□□ 0.29
NclP09405 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
NclP09405 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NclP09405 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NclP09405 AC130823.1-201ENSMUST00000228929 1549 ntBASIC16.89■□□□□ 0.29
NclP09405 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
NclP09405 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NclP09405 AC122860.2-201ENSMUST00000217967 2671 ntBASIC16.89■□□□□ 0.29
NclP09405 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NclP09405 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NclP09405 Gm37122-201ENSMUST00000195313 1567 ntBASIC16.89■□□□□ 0.29
NclP09405 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
NclP09405 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
NclP09405 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
NclP09405 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC16.88■□□□□ 0.29
NclP09405 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC16.88■□□□□ 0.29
NclP09405 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NclP09405 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC16.88■□□□□ 0.29
NclP09405 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NclP09405 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NclP09405 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NclP09405 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NclP09405 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NclP09405 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
NclP09405 Gm14807-201ENSMUST00000116640 983 ntBASIC16.88■□□□□ 0.29
NclP09405 Gm11422-201ENSMUST00000118925 1103 ntBASIC16.88■□□□□ 0.29
NclP09405 Selenot-ps-201ENSMUST00000119098 593 ntBASIC16.88■□□□□ 0.29
NclP09405 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC16.88■□□□□ 0.29
NclP09405 Gm24992-201ENSMUST00000157412 130 ntBASIC16.88■□□□□ 0.29
NclP09405 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
NclP09405 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NclP09405 Gm19166-201ENSMUST00000196041 1063 ntBASIC16.88■□□□□ 0.29
NclP09405 Gm45120-201ENSMUST00000208880 408 ntBASIC16.88■□□□□ 0.29
NclP09405 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
NclP09405 Gm39288-201ENSMUST00000210554 446 ntBASIC16.88■□□□□ 0.29
NclP09405 Gm4811-201ENSMUST00000220879 1220 ntBASIC16.88■□□□□ 0.29
NclP09405 Ap3s1-202ENSMUST00000224622 978 ntBASIC16.88■□□□□ 0.29
NclP09405 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
NclP09405 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NclP09405 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NclP09405 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NclP09405 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NclP09405 Nudt13-207ENSMUST00000224311 1574 ntBASIC16.88■□□□□ 0.29
NclP09405 Gm28424-201ENSMUST00000187393 1319 ntBASIC16.88■□□□□ 0.29
NclP09405 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
NclP09405 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NclP09405 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NclP09405 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NclP09405 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
NclP09405 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC16.88■□□□□ 0.29
NclP09405 AC154639.1-201ENSMUST00000224393 2849 ntBASIC16.88■□□□□ 0.29
NclP09405 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NclP09405 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NclP09405 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NclP09405 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NclP09405 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms