Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Gm29499-201ENSMUST00000189151 486 ntBASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Gm28329-201ENSMUST00000191208 689 ntBASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Gm29171-201ENSMUST00000191397 486 ntBASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Tnfrsf11bO08712 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.52□□□□□ -0.56
Tnfrsf11bO08712 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfrsf11bO08712 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Tnfrsf11bO08712 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Tnfrsf11bO08712 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Tnfrsf11bO08712 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Gm12266-201ENSMUST00000120311 962 ntBASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Gm22846-201ENSMUST00000157706 270 ntBASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Gm17040-202ENSMUST00000170597 889 ntBASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Tnfrsf11bO08712 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Gm5859-201ENSMUST00000165401 2324 ntBASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Mir877-201ENSMUST00000104738 85 ntBASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Gm8731-201ENSMUST00000118088 412 ntBASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Gm14017-201ENSMUST00000121934 386 ntBASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms