Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Olfml3-204ENSMUST00000169286 874 ntBASIC11.09□□□□□ -0.63
Cdh17Q9R100 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.09□□□□□ -0.63
Cdh17Q9R100 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh17Q9R100 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cdh17Q9R100 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.09□□□□□ -0.63
Cdh17Q9R100 Mir219a-1-201ENSMUST00000083621 110 ntBASIC11.09□□□□□ -0.63
Cdh17Q9R100 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.09□□□□□ -0.63
Cdh17Q9R100 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.09□□□□□ -0.63
Cdh17Q9R100 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh17Q9R100 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh17Q9R100 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh17Q9R100 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh17Q9R100 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh17Q9R100 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh17Q9R100 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Cdh17Q9R100 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh17Q9R100 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Cdh17Q9R100 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.09□□□□□ -0.63
Cdh17Q9R100 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh17Q9R100 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh17Q9R100 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cdh17Q9R100 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Cdh17Q9R100 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC11.08□□□□□ -0.64
Cdh17Q9R100 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.08□□□□□ -0.64
Cdh17Q9R100 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Gm12247-201ENSMUST00000117585 670 ntBASIC11.08□□□□□ -0.64
Cdh17Q9R100 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.08□□□□□ -0.64
Cdh17Q9R100 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Gm3150-201ENSMUST00000166418 204 ntBASIC11.08□□□□□ -0.64
Cdh17Q9R100 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.08□□□□□ -0.64
Cdh17Q9R100 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.08□□□□□ -0.64
Cdh17Q9R100 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Cdh17Q9R100 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdh17Q9R100 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Gm12501-201ENSMUST00000119163 529 ntBASIC11.07□□□□□ -0.64
Cdh17Q9R100 Gm14208-201ENSMUST00000119645 678 ntBASIC11.07□□□□□ -0.64
Cdh17Q9R100 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.07□□□□□ -0.64
Cdh17Q9R100 Gm22846-201ENSMUST00000157706 270 ntBASIC11.07□□□□□ -0.64
Cdh17Q9R100 Gm23085-201ENSMUST00000157849 293 ntBASIC11.07□□□□□ -0.64
Cdh17Q9R100 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.07□□□□□ -0.64
Cdh17Q9R100 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Gm42867-201ENSMUST00000202995 469 ntBASIC11.07□□□□□ -0.64
Cdh17Q9R100 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Gm21811-201ENSMUST00000096485 930 ntBASIC11.07□□□□□ -0.64
Cdh17Q9R100 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdh17Q9R100 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms