Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm24844-201ENSMUST00000158679 127 ntBASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Gm7741-201ENSMUST00000181445 989 ntBASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Gm29199-201ENSMUST00000187766 775 ntBASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Gm5369-201ENSMUST00000217499 588 ntBASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Gm6722-201ENSMUST00000221586 390 ntBASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Gm9785-201ENSMUST00000062642 1006 ntBASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Gm5380-201ENSMUST00000119296 2136 ntBASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 AC166359.1-201ENSMUST00000220243 1871 ntBASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 AC113441.2-201ENSMUST00000221538 1468 ntBASIC14.38□□□□□ -0.11
Chmp4bQ9D8B3 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Gm22920-201ENSMUST00000102175 109 ntBASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Gm4909-201ENSMUST00000118749 794 ntBASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Gm15595-201ENSMUST00000120840 961 ntBASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC14.37□□□□□ -0.11
Chmp4bQ9D8B3 Gm44663-201ENSMUST00000206898 3150 ntBASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 AC109214.1-201ENSMUST00000219520 1372 ntBASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Gm17244-201ENSMUST00000192482 3416 ntBASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Gm43622-201ENSMUST00000200140 2019 ntBASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Gm18198-201ENSMUST00000204986 1551 ntBASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Gm44573-201ENSMUST00000191753 2370 ntBASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Gm12217-201ENSMUST00000118858 696 ntBASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Gm5996-201ENSMUST00000211110 718 ntBASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chmp4bQ9D8B3 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms