Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 AC155298.2-201ENSMUST00000225485 6226 ntBASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Orc4-201ENSMUST00000028098 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Gm12791-201ENSMUST00000120788 655 ntBASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Gm15549-201ENSMUST00000121595 622 ntBASIC9.37□□□□□ -0.91
Prpf8Q99PV0 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Gm11960-201ENSMUST00000122068 925 ntBASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Gm22379-201ENSMUST00000157480 131 ntBASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Gm18801-201ENSMUST00000186616 536 ntBASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Gm8197-202ENSMUST00000193422 934 ntBASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 AC153152.3-201ENSMUST00000222188 1135 ntBASIC9.37□□□□□ -0.91
Prpf8Q99PV0 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.37□□□□□ -0.91
Prpf8Q99PV0 CT010506.1-201ENSMUST00000223673 349 ntBASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.37□□□□□ -0.91
Prpf8Q99PV0 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Gm43275-201ENSMUST00000202053 1020 ntBASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Gm43417-201ENSMUST00000201586 5207 ntBASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Gm22594-201ENSMUST00000104251 130 ntBASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Gm43969-201ENSMUST00000204833 535 ntBASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Prpf8Q99PV0 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Prpf8Q99PV0 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Prpf8Q99PV0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC9.35□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms