Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 AC153380.1-201ENSMUST00000214959 2364 ntBASIC12.99□□□□□ -0.33
Trim11Q99PQ2 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trim11Q99PQ2 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Gm12247-201ENSMUST00000117585 670 ntBASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Gm2383-201ENSMUST00000181461 807 ntBASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 AU022133-201ENSMUST00000200601 873 ntBASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.98□□□□□ -0.33
Trim11Q99PQ2 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim11Q99PQ2 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Gm8731-201ENSMUST00000118088 412 ntBASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Gm27552-201ENSMUST00000183351 62 ntBASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Gm27844-201ENSMUST00000183613 62 ntBASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Gm45856-201ENSMUST00000212752 416 ntBASIC12.97□□□□□ -0.33
Trim11Q99PQ2 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim11Q99PQ2 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms