Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhb21Q91V48 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhb21Q91V48 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Pcdhb21Q91V48 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhb21Q91V48 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Pcdhb21Q91V48 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Pcdhb21Q91V48 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdhb21Q91V48 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.33□□□□□ -0.59
Pcdhb21Q91V48 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdhb21Q91V48 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Pcdhb21Q91V48 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Gm12247-201ENSMUST00000117585 670 ntBASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Gm13408-201ENSMUST00000119822 798 ntBASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Gm13935-201ENSMUST00000121859 798 ntBASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Gm24844-201ENSMUST00000158679 127 ntBASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Gm8459-201ENSMUST00000162504 760 ntBASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Mir7686-201ENSMUST00000200604 57 ntBASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Pcdhb21Q91V48 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Gm14071-201ENSMUST00000117817 509 ntBASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Gm23045-201ENSMUST00000175041 96 ntBASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Gm17831-201ENSMUST00000205579 900 ntBASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Gm2517-201ENSMUST00000215651 348 ntBASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Pcdhb21Q91V48 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhb21Q91V48 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhb21Q91V48 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Pcdhb21Q91V48 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Pcdhb21Q91V48 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.31□□□□□ -0.6
Pcdhb21Q91V48 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms