Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm29164-201ENSMUST00000185454 1024 ntBASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Gm44814-201ENSMUST00000207018 434 ntBASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 AC115304.2-201ENSMUST00000226399 332 ntBASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Capsl-202ENSMUST00000226688 739 ntBASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Gm5641-201ENSMUST00000091130 1488 ntBASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.56□□□□□ -0.08
Chmp7Q8R1T1 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Gm6158-201ENSMUST00000109467 904 ntBASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Gm11979-201ENSMUST00000119629 743 ntBASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Gm14165-201ENSMUST00000121456 952 ntBASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Nudt12os-201ENSMUST00000145848 939 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Gm42430-201ENSMUST00000197209 616 ntBASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Gm9102-201ENSMUST00000219250 465 ntBASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Gm10020-201ENSMUST00000081993 612 ntBASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Gm25580-201ENSMUST00000083409 327 ntBASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Chmp7Q8R1T1 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Gm44573-201ENSMUST00000191753 2370 ntBASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Gm25562-201ENSMUST00000104608 133 ntBASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Gm15620-201ENSMUST00000122949 270 ntBASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Mir6923-201ENSMUST00000184592 72 ntBASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Gm5870-201ENSMUST00000196461 282 ntBASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Gm18035-201ENSMUST00000211962 589 ntBASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 AC159002.1-201ENSMUST00000226714 924 ntBASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Smok4a-201ENSMUST00000074512 1455 ntBASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp7Q8R1T1 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms