Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.21□□□□□ -0.61
Treml1Q8K558 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
Treml1Q8K558 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Treml1Q8K558 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Treml1Q8K558 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Treml1Q8K558 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Treml1Q8K558 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Treml1Q8K558 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Treml1Q8K558 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Treml1Q8K558 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Treml1Q8K558 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Treml1Q8K558 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Treml1Q8K558 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Treml1Q8K558 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Treml1Q8K558 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Treml1Q8K558 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Treml1Q8K558 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Treml1Q8K558 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.21□□□□□ -0.62
Treml1Q8K558 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Treml1Q8K558 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Treml1Q8K558 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Treml1Q8K558 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Treml1Q8K558 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Treml1Q8K558 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.2□□□□□ -0.62
Treml1Q8K558 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Treml1Q8K558 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.2□□□□□ -0.62
Treml1Q8K558 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.2□□□□□ -0.62
Treml1Q8K558 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.2□□□□□ -0.62
Treml1Q8K558 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.2□□□□□ -0.62
Treml1Q8K558 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.2□□□□□ -0.62
Treml1Q8K558 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Gm22334-201ENSMUST00000158070 133 ntBASIC11.2□□□□□ -0.62
Treml1Q8K558 Gm23045-201ENSMUST00000175041 96 ntBASIC11.2□□□□□ -0.62
Treml1Q8K558 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.2□□□□□ -0.62
Treml1Q8K558 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.2□□□□□ -0.62
Treml1Q8K558 Gm37905-201ENSMUST00000195310 341 ntBASIC11.2□□□□□ -0.62
Treml1Q8K558 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.2□□□□□ -0.62
Treml1Q8K558 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.2□□□□□ -0.62
Treml1Q8K558 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.2□□□□□ -0.62
Treml1Q8K558 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.2□□□□□ -0.62
Treml1Q8K558 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
Treml1Q8K558 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Treml1Q8K558 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.2□□□□□ -0.62
Treml1Q8K558 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
Treml1Q8K558 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Treml1Q8K558 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.2□□□□□ -0.62
Treml1Q8K558 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.2□□□□□ -0.62
Treml1Q8K558 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.2□□□□□ -0.62
Treml1Q8K558 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Treml1Q8K558 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.2□□□□□ -0.62
Treml1Q8K558 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Treml1Q8K558 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Treml1Q8K558 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Treml1Q8K558 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Treml1Q8K558 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Treml1Q8K558 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Treml1Q8K558 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Treml1Q8K558 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Treml1Q8K558 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Treml1Q8K558 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Treml1Q8K558 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Treml1Q8K558 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.19□□□□□ -0.62
Treml1Q8K558 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Treml1Q8K558 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Treml1Q8K558 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Treml1Q8K558 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Treml1Q8K558 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.19□□□□□ -0.62
Treml1Q8K558 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Treml1Q8K558 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Treml1Q8K558 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Treml1Q8K558 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Treml1Q8K558 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms