Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Gm22920-201ENSMUST00000102175 109 ntBASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Gm11331-201ENSMUST00000119764 288 ntBASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Gm12407-201ENSMUST00000180219 324 ntBASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Gm43002-201ENSMUST00000200310 155 ntBASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Gm4978-201ENSMUST00000071565 801 ntBASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Rfwd3Q8CIK8 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 AC129336.1-201ENSMUST00000220224 2277 ntBASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Gm24844-201ENSMUST00000158679 127 ntBASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Mir3547-201ENSMUST00000175461 88 ntBASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Mir7686-201ENSMUST00000200604 57 ntBASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Gm44506-201ENSMUST00000206278 965 ntBASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Rfwd3Q8CIK8 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms