Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm26660-202ENSMUST00000223620 4112 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc87Q8CDL9 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Mir8093-201ENSMUST00000185043 137 ntBASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Gm34767-201ENSMUST00000191813 1062 ntBASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Gm43962-201ENSMUST00000203898 190 ntBASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Gm18730-201ENSMUST00000218038 343 ntBASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc87Q8CDL9 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Gm13323-201ENSMUST00000120245 1151 ntBASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Gm28071-201ENSMUST00000190355 478 ntBASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Gm6450-201ENSMUST00000200896 574 ntBASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc87Q8CDL9 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms