Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Gm25880-201ENSMUST00000104331 132 ntBASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Gm12990-201ENSMUST00000120372 468 ntBASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Gm15197-201ENSMUST00000120526 478 ntBASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Gm22379-201ENSMUST00000157480 131 ntBASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Gm22877-201ENSMUST00000175451 105 ntBASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Gm44323-201ENSMUST00000198689 129 ntBASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Gm16380-201ENSMUST00000077997 478 ntBASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 n-R5s185-201ENSMUST00000083953 119 ntBASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sh3rf2Q8BZT2 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Gm12218-201ENSMUST00000117666 399 ntBASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Gm43966-201ENSMUST00000203301 612 ntBASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Gm18059-201ENSMUST00000208073 580 ntBASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Gm5599-201ENSMUST00000209602 788 ntBASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Sh3rf2Q8BZT2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Sh3rf2Q8BZT2 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms